People

Jeffrey Rathmell, PhD

Jeffrey Rathmell, PhD


Dr. Rathmell studies mechanisms by which extracellular cues influence lymphocyte death and differentiation in efforts to control inflammatory diseases and leukemia. Following undergraduate studies on Biology at the University of Northern Iowa, he earned a Ph.D in Immunology on B cell tolerance and death mechanisms at Stanford University. In postdoctoral studies at the University of Chicago and University of Pennsylvania, he showed that lymphocyte metabolism was dynamically regulated by growth factors and controls apoptotic mechanisms. He began at Duke University in 2003 in the departments of Pharmacology and Cancer Biology and Immunology, as well as a member of the Duke Molecular Physiology Institute. Dr. Rathmell's group showed that the metabolism of T cells is highly dynamic and that specific metabolic programs are essential for each functional T cell subsets. These fundamental metabolic distinctions may now allow modulation of selective populations of lymphocytes in inflammatory diseases and anti-tumor immunity. He joined the faculty of Vanderbilt University in 2015 as Professor of Pathology, Microbiology, and Immunology to direct the Vanderbilt Center for Immunobiology and co-lead the Vanderbilt Ingram Cancer Center Host Tumor Interactions Program. He is Associate Director of the Vanderbilt Institute of Infection, Immunology, and Inflammation and co-leader of the Molecular Pathology and Immunology Ph.D training program.

 

 

 

Administration:

Summer Brown, MA

Summer Brown, MA

she/her

Program Manager, Vanderbilt Center for Immunobiology


I manage the operations of the Vanderbilt Center for Immunobiology, directed by Dr. Rathmell, along with his calendar and other events for the Center and lab.

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Heather Durai

Heather Durai

she/her

Senior Research Specialist


As a lab manager with 20 years technical and research administration experience at VUMC, I help to ensure the smooth operation of the lab and support the overall success of our lab members.

 

Staff Scientists:

Zachary Bacigalupa, Ph.D.

Zachary Bacigalupa, Ph.D.

he/him

Research Assistant Professor

Managing Director of Functional Genomics Core


My primary focus is aiming to understand the crosstalk that occurs between metabolism and epigenetic modifications in HIF-driven kidney cancers that are genetically unique. To support this, I have developed Cas9 editing constructs that are responsive to active HIF signaling and am screening a library of genes encoding epigenetic modifiers, as well as several major metabolic pathways.

Notable publication:

HIF-2α expression and metabolic signaling require ACSS2 in clear cell renal cell carcinoma

Jackie Bader, Ph.D.

Jackie Bader, Ph.D.

she/her

Research Assistant Professor


My research interests are to understand mechanisms that impact macrophage metabolism and how they can be targeted in obesity associated cancer therapies. A greater understanding of the macrophage related mechanism behind the obesity paradox will allow for new therapeutic targets outside of the established T cell targets and create a personalized approach to immunotherapy treatment. Particularly, understanding how obesity and weight loss impact bone marrow progenitors and induce innate memory may uncover biomarkers to predict or enhance patient selection for treatment regimens.

Notable publication:

Obesity induces PD-1 on macrophages to suppress anti-tumour immunity

Katie Beckermann, M.D./Ph.D.

Katy Beckermann, M.D., Ph.D.


My research interest is identifying metabolic barriers to T cell function and immunotherapy in renal cell carcinoma.

Notable publication:

A Non-apoptotic Function of MCL-1 in Promoting Pluripotency and Modulating Mitochondrial Dynamics in Stem Cells

Xiang Ye, Ph.D

Xiang Ye, Ph.D.


Bioinformatics, Data analysis, Computational Biology

Notable publication:

MTHFD2 is a metabolic checkpoint controlling effector and regulatory T cell fate and function

 

Current Post-Doctoral Fellows:

Andrew Patterson, PhD.

Emily Arner, Ph.D.

PostDoc Fellow


I study cancer cell instrinsic and extrinsic mechanisms of epithelial plasticity and metastasis. I aim to understand both how metabolism and immune-cancer cell interactions in the tumor microenvironment influence each step of the metastatic cascade using patient samples and mouse models.

Notable publication:

Metabolic programming and immune suppression in the tumor microenvironment

Andrew Patterson, PhD.

Michael Davidson, M.D., Ph.D.

PostDoc Fellow


I have a background in mitochondrial bioenergetics, particularly cardiac mitochondria in the context of heart failure. As a post-doc, I aim to study the role of mitochondrial bioenergetics of primary effector T cells under normal and pathologic conditions.

Notable publication:

Extreme Acetylation of the Cardiac Mitochondrial Proteome Does Not Promote Heart Failure

Andrew Patterson, PhD.

Matthew Stier, M.D., Ph.D. 

he/him

Critical Care Fellow

PostDoc Fellow


My research focuses on the metabolic dynamics of sepsis, particularly how it rewires the immune system towards pathologic levels of immunosuppression. Despite being a leading cause of ICU mortality, sepsis lacks targeted therapies, leaving patients dependent exclusively on supportive care. Using human biospecimens from ICU patients at Vanderbilt in true “bedside-to-bench” fashion, we explore the metabolic pathways and mechanisms that drive immune dysfunction in sepsis, aiming to discover new therapeutic targets. Ongoing work examines how sepsis reshapes CD4 and CD8 T cell metabolism and includes the development of novel methods for measuring metabolic flux in human biospecimens, with the goal of translating these insights into future therapies.

Notable publication:

Androgen signaling restricts glutaminolysis to drive sex-specific Th17 metabolism in allergic airway inflammation

Andrew Patterson, PhD.

Benjamin Wilander, Ph.D. 

he/him

PostDoc Fellow


I study the the effects of temperature on immune cell function and metabolism in the context of disease and fever development. Conversley, I am also interested in how immune cells harness heat generation as a property of their effector function and how thermal generation impacts immune cell metabolism.

Notable publication:

DRAK2 regulates myosin light chain phosphorylation in T cells

 

Current Graduate Students:      

Joseph DeCorte

Graduate Student


I’m interested in designing cancer therapeutics that target interactions between the cancer and the immune system, with particular interest in proximity-inducing molecules like Proteolysis Targeting Chimeras (PROTACs). As a graduate student, I design and evaluate PROTACs that degrade enzymes in glutamine metabolism to increase immune-cell anti-tumor response and nutritionally restrict cancer cells.

 

Yujie (Christina) Ding

she/her

Graduate Student


My research focuses on the DNA damage and repair response of different CD4+ T-cell subsets in the fever environment. I aim to investigate the role of cellular metabolism in modulating DNA damage and repair and to identify the mechanisms underlying mtDNA escape in response to heat. I am also interested in exploring the functions and metabolism of CD4+ T cell subsets at cooler temperatures.

Notable publication:

Clinical Efficacy of ONC201 in H3K27M-Mutant Diffuse Midline Gliomas Is Driven by Disruption of Integrated Metabolic and Epigenetic Pathways

Emma Hathaway

Emilie Fisher-Gupta

she/her

Graduate Student


I study ways to enhance cellular immunotherapies via altering CD8+ T cell metabolism. Specifically, I study the enzyme glutamine synthetase (GS) and the impacts of inhibition on cell survival and function in the tumor microenvironment.

Emma Hathaway

Emma Hathaway

she/her

Graduate Student


My research aims to improve CAR-T cell therapy for solid tumors. Despite success in hematologic malignancies, clinical efficacy of CAR-T cell therapy against solid tumors remains limited. I am interested in studying how CAR-T cells adapt to and survive in the tumor microenvironment of solid tumors with the goal of identifying novel targets to improve their function and efficacy.

Notable publication:

Immunometabolic Maladaptations to the Tumor Microenvironment

Casey Nichols

Graduate Student


My research focuses on the role of the aryl hydrocarbon receptor in CD4 and CD8 T cell metabolism in sepsis.

Rachael Smith

Graduate Student


My research focuses on understanding how innate immune sensors and fever affect CD4+ T cell function and metabolism with the goal to develop a method to harness these effects for cancer immunotherapy.

Notable publication:

Subset-specific mitochondrial stress and DNA damage shape T cell responses to fever and inflammation

KayLee Steiner

she/her

Graduate Student


I study lipid metabolism in T cells. I aim to understand how mitochondrial fatty acid synthesis supports t cell function and metabolism, and to manipulate lipid metabolic pathways to reduce disease severity

Notable publication:

Mitochondrial Fatty Acid Synthesis and Mecr Regulate CD4+ T Cell Function and Oxidative Metabolism

Spenser Stone

she/her

Graduate Student


Although immune checkpoints have canonically been studied in T cells, I am interested in characterizing them in the context of tumor associated macrophages. Specifically, I am exploring the mechanisms that govern Lag3 expression on macrophages and how this population contributes to mechanisms of resistance in cancer.

Notable publication:

The Chlamydia trachomatis p-aminobenzoate synthase CADD is a manganese-dependent oxygenase that uses its own amino acid residues as substrates

Yasmine Toudji

she/her

Graduate Student


My research focuses on the effect of mild heat stress on different CD4+ T cell subsets and the metabolic and signaling pathways that drive their differential adaptation. My goal is to understand the involvement of the cellular stress response and glutamine metabolism in the enhanced T cell responses at fever-range temperature which may reveal actionable targets for treating inflammatory diseases such as autoimmunity.

Notable publication:

Subset-specific mitochondrial stress and DNA damage shape T cell responses to fever and inflammation

 

Research Assistants:

Madelyn Landis

Allie Blount

Research Assistant


I focus mainly on the change in effector function and metabolism of renal cell carcinoma T cells after immune checkpoint blockade in primary human samples, while also coordinating a multidisplinary clinical trial that studies pediatrics with primary immunodeficiency disorders.

Sam Schaefer

Zaid Hatem

Research Assistant


I am interested in understanding the immune cross talk between the tumor microenviornment and the viceral adipose reservoirs in Clear Cell Renal Cell Carcinoma (ccRCC) patients. I am also interested in investigating the role of TREM2+ Tumor associated Macrophages In The Tumor Microenvironment of RCC.

Sam Schaefer

Sam Schaefer

he/him

Research Assistant

Functional Genomics Core Assistant


I help run the Functional Genomics Core (CRISPR screens in mouse and human cell lines, healthy donor experiments) while also helping out around the lab with other experiments

Sam Schaefer

Allison Sewell

she/her

Research Assistant


My main project is focused on the metabolic rewiring of CD4 immune cells in sepsis and critical illness. In addition, I support fellow lab members in both administrative and experimental capacities.

Notable publication:

Elevated transferrin receptor impairs T cell metabolism and function in systemic lupus erythematosus

 

Undergraduate Researchers:

Shreeti Amit

Shreeti Amit

Undergraduate Researcher


My research focuses on how sex differences and fever affect CD4+ Th17 cells in both their function and merabolism. I work primarily with mass spectrometry.

Shreeti Amit

Jeffrey Perera

he/him

Undergraduate Researcher


My research with Emilie Fisher-Gupta focuses on how glutamine synthetase regulates metabolism and function in CD8+ and CD4+ T cell subsets. Using functional genomic approaches, we target glutamine synthetase to uncover its role in T cell-mediated immunity and explore therapeutic strategies to enhance T cell function.

Past Post-Doctoral Fellows:

Arissa Young, M.D

Rheumatology Fellow, University of California, Los Angeles

 

Saara Kaviany, DO

Assistant Professor of Pediatrics, University of Chicago

 

Diana Contreras, Ph.D.

Microbiology and Immunology

Current Senior Clinical Trials Assistant- Contract Partner of Amgen, IQVIA, Clayton, NC

 

Stephanie Dudzinski, Ph.D.

MSTP

Radiation Oncology Resident, MD Anderson Cancer Center, Houston, TX

 

Nancie MacIver, M.D./Ph.D.              

Assistant Professor (tenure track) Duke University, Pediatric Endocrinology

 

Liza Makowski, Ph.D.                         

Assistant Professor (tenure track) University of North Carolina at Chapel Hill, Nutrition

 

Ryan Michalek, Ph.D.                         

Senior Study Director, Metabolon Inc., Durham, NC

 

Pankuri Goraska-Hicks, Ph.D.             

Director of Oncology Studies, Gentris

 

Alfredo Caro-Maldonado, Ph.D.          

Post-doctoral Researcher, CIC BioGUNE, Spain

 

Andrew Macintyre, Ph.D.                   

Education and Professional Development Manager at American Society for Biochemistry and Molecular Biology (ASBMB)

 

Peter Siska, M.D.

Hematology-Oncology fellow at University Hospital Regensburg

 

Sivan Cohen, Ph.D.

Scientist, Genentech, San Francisco, CA

 

Andrew Patterson, Ph.D.

Assistant Professor in the Department of Biochemistry and Molecular Genetics at the University of Louisville School of Medicine

 

Kelsey Voss, Ph.D.

Assistant Professor in the Department of Pharmacology at the University of Virgiania School of Medicine

 

Erin Jennings, Ph.D., MLS 

NCI T32 Postdoctoral Trainee in Biochemical and Chemical Training for Cancer Research

 

Past Graduate Students:

 

Dalton Greenwood, Ph.D.

Molecular Pathology and Immunology

 

Ayaka Sugiura, M.D., Ph.D. 

Medical Scientist Training Program

 

Matt Madden, M.D., Ph.D.

Medical Scientist Training Program

Pathology Residency, Yale School of Medicine

 

Jessica Wofford           

Pharmacology              Defended PhD 11/29/2007

Current Clinical Scientist-Drug Development, Aratana Therapeutics, Kansas City, MO

 

Yuxing Zhao               

Pharmacology              Defended PhD 12/6/2007

Currently a Police Officer, Melbourne Australia.

 

Heather Wieman         

Molecular and Cellular Biology               Defended PhD 04/08

Senior Scientist, ZenBio, Research Triangle Park, NC

 

Kathleen O’Hara         

Immunology                 Defended M.S. 2009

Associate Veterinarian at United Veterinary Specialty and Emergency, San Francisco

 

Sarah Jacobs                

Molecular and Cellular Biology              Defended PhD 11/2009

Current Post-doc with Blossom Damania at UNC Chapel Hill

 

Emily F Mason              

Molecular and Cellular Biology/Medical Scientist Training Program    Defended PhD 7/2010

Assistant Professor at Vanderbilt University, Department of Pathology

 

Jonathan Coloff           

Pharmacology              Defended PhD 9/2010

Post-doc with Joan Brugge at Harvard Univeristy

 

Brian J. Altman            

Molecular and Cellular Biology                Defended PhD 5/2011

Post-doc with Chi Dang, University of Pennsylvania

 

Valerie A. Gerriets       

Pharmacology             Defended PhD 2/21/2014

Assistant Professor of Pharmacology, California Northstate University College of Medicine

 

Tingyu Liu         

Pharmacology              Defended PhD 10/20/2014

Post-doc with Jeffrey Engelman, Harvard University

 

Rigel Kishton

Pharmacology              Defended PhD 05/09/2016

Post-doc with Nick Restifo, National Cancer Institute (Surgery Branch)
 

Marc Johnson      

Pharmacology/Cancer Biology     Defended PhD 11/09/2018

Scientist, Surface Oncology, Cambridge MA

 

Darren Heintzman, PhD

Molecular Pathology and Immunology

Investment Research Analyst, Nashville, TN

 

Gabriel Rodriguez Garcia, PhD

Molecular Pathology and Immunology

 

Past Research Assistants:

Katherine Beier

Veterinary Student, Cornell University College of Veterinary Medicine

 

Channing Chi

Medical Student, Vanderbilt University School of Medicine

 

Debolanle Dahunsi            

Medical Student, University of Illinois College of Medicine

 

Rachel Hongo

Graduate student, Harvard Biological and Biomedical Sciences Program

 

Madelyn Landis

Graduate Student, University of Pennsylvania